Index

_

__init__() (moddr.embedding_state.EmbeddingState method)

__str__() (moddr.embedding_state.EmbeddingState method)

A

apply_balance_factor() (in module moddr.processing.processing)

assign_graph_edge_weights() (in module moddr.processing.processing)

C

community_centers (moddr.embedding_state.EmbeddingState attribute) community_detection_leiden() (in module moddr.processing.processing) compute_boundary_subgraph() (in module moddr.processing.processing) compute_community_graphs() (in module moddr.processing.processing) compute_continuity() (in module moddr.evaluation.evaluation) compute_coranking_matrix() (in module moddr.evaluation.evaluation) compute_dist_score() (in module moddr.evaluation.evaluation) compute_distance_scaling() (in module moddr.processing.processing) compute_fruchterman_reingold_layout() (in module moddr.processing.processing) compute_kamada_kawai_layout() (in module moddr.processing.processing) compute_knn_graph() (in module moddr.processing.processing)

compute_kruskal_stress() (in module moddr.evaluation.evaluation) compute_kruskal_stress_partition() (in module moddr.evaluation.evaluation) compute_mds_layout() (in module moddr.processing.processing) compute_metrics() (in module moddr.evaluation.evaluation) compute_modified_positions() (in module moddr.processing.processing) compute_pairwise_dists() (in module moddr.processing.processing) compute_rank_score() (in module moddr.evaluation.evaluation) compute_rnx() (in module moddr.evaluation.evaluation) compute_total_score() (in module moddr.evaluation.evaluation) compute_trustworthiness() (in module moddr.evaluation.evaluation) create_report() (in module moddr.evaluation.evaluation)

D

dimensionality_reduction_umap() (in module moddr.processing.processing)

display_embeddings() (in module moddr.visualization.visualization)

E

embedding (moddr.embedding_state.EmbeddingState attribute)

EmbeddingState (class in moddr.embedding_state)

G

graph (moddr.embedding_state.EmbeddingState attribute)

L

labels (moddr.embedding_state.EmbeddingState attribute)

M

metadata (moddr.embedding_state.EmbeddingState attribute) metrics (moddr.embedding_state.EmbeddingState attribute) moddr.evaluation.evaluation module moddr.processing.processing module

moddr.visualization.visualization module module moddr.evaluation.evaluation moddr.processing.processing moddr.visualization.visualization

O

obj_id (moddr.embedding_state.EmbeddingState attribute)

P

partition (moddr.embedding_state.EmbeddingState attribute) plot_community_graphs() (in module moddr.visualization.visualization)

plot_metrics_report() (in module moddr.visualization.visualization) plot_pos_movements() (in module moddr.visualization.visualization)

R

run_pipeline() (in module moddr.processing.processing)

T

title (moddr.embedding_state.EmbeddingState attribute)